I'm having the same issues with my NY State return. When I filed my federal, I could not file my State due to an error stating Turbo Tax was still working on a software update on my state return. Therefore, I went ahead and filed the Federal and clicked I would file the State later. Now that the issue with the Turbo Taxes State software has been updated. I'm getting the same message as you are. Stating I must choose a Federal Return to file my State.
