State tax filing

I am having the  same problem, TT did not ask what county I worked in, did not enter county tax due, and now it looks like I get the whole amount back from Indiana. But it was a wash, I paid in exactly what was due. I am claiming the IN County tax due on my MI taxes. So I am getting a double amount back. I don't know if I should just not file Indiana, or take the credit off the MI taxes.