You might still be OK. Checking the US Government (Including Military) box should still put your New York State retirement into the correct column. I don't think it matters which box you check as long as the selected pension is New York State tax exempt. The original issue was the NYSLRS box was not calculating as New York State tax exempt.
You can double check by clicking on the Forms tab in the upper right hand corner. Scroll down to New York Form IT-201 Page1-2. Line 26 should show your New York State pension amount. If it is blank then it will probably get rejected again. If it has your full retirement amount listed you should be good to go.
Good Luck!
@gbishop-593
