You should be filing as a NY nonresident and a PA resident.
On the NYS return you will allocate as mentioned above.
On the PA return you have an option to choose how much of the NY income is taxable to PA.
Enter the same amount that you used for your NY income.
A few screens later you will see the Credit for taxes paid to another state.
Enter the information you will then be credited @ 3.07% of income taxable to both states on your PA return.
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