State tax filing

You should not need to allocate anything ...

You must file a non-resident NY tax return in addition to your home state NJ tax return.

You'll be able to take a credit on your NJ return for taxes paid to NY, so you won't be double-taxed.

In TurboTax, be sure to complete your non-resident state return before you do your home state return, so that the credit flows properly.

See this FAQ for more detailed instructions:  https://ttlc.intuit.com/questions/1901271-how-do-i-file-a-nonresident-state-return