TurboTax is broken down into interview sections, one for federal and one for state where state specific information is entered.
It sounds like you are making the entries in the business section, which would be located in the federal interview section.
I would suggest reviewing your forms and comparing them to the return as originally filed. A possibility is the federal changes to your business activity do not affect your overall business loss which is why you aren't seeing any changes on the federal side.
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