After you file

It's will be surprising that your amended return will be or has been accepted so soon after filing the original. The general advice is that you have to wait until your original return is fully processed before filing an amended one. We have no way of knowing what will happen. 

 

the amended return you filed was incorrect since it did not reflect what you authorized to be paid with your original return. Turbotax does not assume it was paid on the amended return. That's why it shows you owe thousands. 

 

at this point hope the amended return is rejected. if not, you can try calling the IRS to explain but do not file another amended return.

 

Call 800-829-1040
1) Choose your language,
2) Then choose option 2
3) Then 1
4) Then 3
5) Then 2
6) When it asks you to enter your SSN or EIN do nothing – wait - - After it asks twice, you will get another menu
7) Then 2
😎 Then 3

It should then transfer you to an agent. Note when its phone line are busy you may be on hold for a long while or disconnected