First, do not file an amended return. Since the IRS made an adjustment on your return you can get this corrected directly with interaction with the IRS. TurboTax is not involved in the processing of the return once it has been accepted by the IRS, therefore we can not assist with your issue. Privacy Laws prevent IRS from sharing information with TurboTax.
However, IRS should send a Notice of Adjustment to you in a few days. When you receive that notice, it will have contact information in the upper right corner. Use that information to reach out to the IRS to start discussion. It is not all lost, you can present your case.
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