TurboTax doesn't have anything to do with your return once it is accepted and processed so in this case I am afraid that you need to contact New York.
They will almost certainly be sending you a letter explaining what changed on your return. You can wait for that or contact them now.
The New York State Department of Finance contact info is here.
**Say "Thanks" by clicking the thumb icon in a post
**Mark the post that answers your question by clicking on "Mark as Best Answer"
