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After you file
I did get it to work finally.
In my amendment I did not touch any of the dependant info, only updated some income info. However TurboTax kindly added my son who was in the prep worksheets (He had a 1099T) but did not get entered on the 1040. When the 1040X was created Turbo tax felt the need to enter my son automatically causing the issue.
To resolve this I had to go back to the dependant portion delete him as a possible dependant, which immediately caused another issue because now I had a 1099T floating floating around not attached to anyone. Once I attached it to my daughter, I could go back into the work sheet and then delete that as well. Once I deleted my son's 1099T and his profile the forms matched and were accepted.
By deleting my now non dependant son (over 22), it did not change any of my taxes. I should be squared away now.
These posts at least gave me some direction of what to look for. Thanks