Will turbo tax take out what I owe on amended return?

I had to amend my 2020 return and I owe money to my state. When I filed, turbo tax said it would take the money out of my account on the day I specified. But then I got a letter from my state saying I need to pay online or mail it in. I don't want the money owed taken out of my account twice. Do I wait for TT to take it out or pay IRS directly?