I think the IRS is way behind. This happened to me except it went really wrong. I called TurboTax to inquire because State debited right away and no Federal. I was told I had to pay the IRS directly; even though I swore I paid when I filed.
Hopped over to the IRS site, paid and then 2 days later, another debit - I assume from my TurboTax payment; 20 days after initial payment.
I am very annoyed to say the least, so my advice is just be patient and keep an eye out if you know you paid when you filed.
