After you file

Sounds like your employer may be at fault, by either not sending in the required paperwork to the SSA and IRS  (or doing so late) and/or failing to remit the taxes withheld from your pay to the IRS.   If so, it could be sloppy bookkeeping, incompetence, or even outright fraud. Do any of your coworkers have a similar problem?

 

I don't necessarily see an issue with the accountants here. They can only work with what they are given.  You may wish to see an attorney.