Filed 2020 taxes with stimulus recovery credit. Received stimulus payment after filing my taxes. Will the IRS fix the credit issue on their end or will it be amended?

2020 taxes was processed before I had received my second stimulus check. Two days after submitting my tax documents, I receive a irs notification that my stimulus payment will post in three business days. Will my taxes get fixed internally for the stimlus payment with the IRS or will my tax refund get delayed do to this system error?