After you file

The standard deduction is listed on form 1040 line 12.  It will just be the amount $27,400 (for married filing jointly when both spouses are 65 or older), it isn't calculated anywhere else on the form. 

 

Your disabled dependent will be a $500 credit on form 1040 line 19.

 

In your original question when you asked about "$28,300" for "3", you might be thinking of table 7 in publication 501.  But that only applies to you and your spouse.  If you and your spouse check 3 of the boxes, the standard deduction would be $28,300.  But the boxes are,

  • spouse 1 is over 65;
  • spouse 2 is over 65,
  • spouse 1 is blind,
  • spouse 2 is blind.

These bumps to the standard deduction never apply to other family members, even if you take care of them and claim them as dependents.  If you claim your son as a tax dependent, there will be a credit on line 19, not a bump in the standard deduction.