You can't e-file the amendment; it has to be printed, signed, and mailed. And the IRS is not processing them right now, so no rush needed. But as long as the 1099 you added did not have anything to do with your mortgage (or rental or home office), you can by-pass the ''check''.
You can go back through the mortgage interview if you itemized and/or took any deductions related to the mortgage interest you reported. If you want to do this, type in 1098 into the search bar and review the entries.
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