I've just filed a 1040X to amend my return after getting an additional w2. Will the initial refund still be direct deposited, or be withheld until the 1040x is processed?

My initial refund after e-filing was $699, and my additional refund (via the 1040X) after entering the new w2 is $648. Will the $699 still be direct deposited by the date given through "track my return," or will it be withheld until the 1040x is also processed, and the $699+$648 total mailed as a check?