After you file

It is complicated to amend a return NOT originally done with the TT program  so you must have missed a step ...

 

First you had to enter the entire original return AS FILED, then indicate you would mail in the return so the program will archive it, then open the return and use the amendment process.  After you finished amending the federal return you need to go to the state tab and indicate that it also needs amending ... did you miss that last step ?