Based on what you said the numbers do appear to be reversed. I'm not going to try to figure that out.
Did you pay $5,000 to the IRS at some point already?
If you did and your tax liability is $3,200 there will not be a problem. The IRS is not looking for that money right now. However, when you complete your tax return it will determine if you have a refund or you owe additional taxes. If you do owe additional taxes you may owe penalties and interest.
The extension calculation is a heads up for you to pay off any balance before those penalties and interest grow.
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