The vehicle deduction is specific to the activity where the mileage is reported. So if you report that you stopped using this vehicle for one property, this should have no effect on the other properties where it is used.
It's important to match the vehicle expenses to the activity. Because the vehicle is shared, you would need to allocate your actual expenses (or the mileage deduction) to each rental property if you decided to enter this as a Miscellaneous Expense for those properties.
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