It is probably due to the rounding of the numbers. You have to look at the Qualified Dividends and Capital Gains Worksheet to see the full calculation. TurboTax has an accuracy guarantee.
All tax software has rounding issues. The IRS understands it, and they ignore small discrepancies. It's not a "huge flag" or even a small flag. But again, the accuracy guarantee is in place in the event the rounding causes you to owe any penalties or interest.
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