Same problem here in 2022. When my taxes were complete, TurboTax was going to charge me for filing both federal and state returns, even though I have the QuickBooks Self-Employed tax bundle. After spending about 2 hours in chat and one phone with TurboTax, they had me call QuickBooks. I spent over an hour on the phone with them and couldn't figure out how to fix it, then had me Chat with TT support while on the phone w/QuickBooks. TT told me I needed to clear and start over. Quickbooks person re-set my data and walked me through importing to TurboTax. At the start of doing my taxes - AGAIN - the fees showed as $0. After re-entering all my info, after the final review TT said I owed $199 fed + $54 state!! I have used TT many years, but this is probably my last. I see an option to enter a "Service Code" by the fees; not sure why no one can just give me a code to bypass the duplicate fee.
