The IRS gets the totals for Dec 31 and knows what your total RMD should be. As long as your total matches or greater than IRS determines, no problem. You do not need to mark anything special. Just put whatever distribution as all RMD and don't worry about more or less for that particular account.
The program is trying to determine your taxable amount from a partial. Since your total is correct, mark all RMD.
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