LLC's and Schedule E Worksheets

We had an accountant prepare the taxes for our LLC.  There is both rental and royalty income associated with this small LLC.  There was no Schedule E included with the K-!, yet Turbo Tax is generating one as I prepare my taxes.  Turbo Tax says that income from rental real estate and income from royalties must be reported as separate properties on Schedule E.  I called the accountant's office and was told that Schedule E's are not used with LLC's.