This is strange because everything works smooth until I get to smart check. Once I am asked to choose which schedule for box 3 on the 1099-MISC form, the refund goes down over $1000. That would seem that I am paying 42% tax on that stipend. It seems that I must be doing something wrong. Are there different forms that I have messed up on? I have read the steps on how to properly input a 1099-MISC. When I delete the 1099-MISC the refund goes back up. When I re-enter the 1099-MISC the refund does not change until I get to the Smart Check portion of Turbo Tax. I am happy to pay the taxes if that is what I owe, I just want to check and see if I have done something wrong.