When filling out Form 1040ES for a 2016 stock sales do I report the income from the sale or all income. Including my salary from which my company makes withholdings?

I made a stock sale this month (may 2016).  I think I need to pay the capital gains and to do this i need to fill out 1040 ES.  But I just wanted to know if this form was just for the stock sales or I had to include my salary wages which already have taxes withheld. 

Thanks Much