No, TurboTax will not be aware. TurboTax is not linked to the IRS in regards to knowing anything about a taxpayers situation, we only transmit the return to the IRS and States for processing. TurboTax also cannot determine what the IRS will do, you may get your refund you may not, the program will not know. Since you will have to file your return anyway, simply complete the process and see if it will ok.
