As an employee of the S corporation, you should be receiving a Form W-2 reporting your wages and withholdings just as any other employee would receive.
There is usually NO reason for you to receive a Form 1099 from an S corporation if you have received the W-2.
You should be receiving a Schedule K-1 from the S corporation's Form 1120-S which reports to you your share of the income and expenses of the S corporation which you report in your personal income tax return beginning on Schedule E. Since the S corporation took a deduction for the wages paid to you, this does not cause your income to be reported twice.
