Yes, you must enter the income for each spouse for each type of income. Do not combine them when entering the information. All income must be entered into your federal return. The return information will flow from the federal to the states automatically. If the states do not tax social security it would automatically be removed on your state returns. As far as the other income, (retirement, IRAs, investments), when you get to your state returns you will adjust the amounts so the correct amount is taxed during your residency period.
Follow the steps provided by @AmyC to enter the correct income for each state.
@mjckhc
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