if the amount that is shown on your W2 for your New York wages is incorrect then you should request a corrected W2 showing the correct amounts. That makes life easier.
You can change the amount that you are entering in your W2 to the correct amount or make an adjustment on your New York non-resident return to reflect the correct amount. Just be aware that New York can be aggressive about attempting to collect taxes that it thinks are owed to it so make sure to document any changes you make and proof for those changes in case there are questions later.
@SeattleRandyK
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