IRS did not process quarterly 2024 payment in Jan, 2025. Do I skip it and just take the penalty (I filed the quarterly directly and not thru TT).

I filed directly with the IRS Jan, 2025 for 2024 and gave them permission to take payment. This week (mid-March), I found they hadn't taken payment. I called them and they said it was GLITCH in their system and recommended I resubmit. But I am so close to tax time, it is going to not get processed in time. What do I do?