TurboTax is likely trying to save you some tax dollars. Please look at line 2 on the IA 1040. See where it says, "Married filing a joint return. (Two-income families may benefit by using status 3 or 4.)"
I have seen other states do this, but TurboTax asked you if you wanted to make the change. Here, apparently, it was so obvious that you would benefit that TurboTax chose option 3 (in my test).
So, likely, there is not a problem.
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