No, this question means any contributions made to your HSA but NOT through your employer. Were you aware that you have two ways to put money in your HSA: through your employer by payroll deduction and by sending money directly to your HSA (i.e., not through your employer but through the mail or whatever).
NOTE: the code W amount refers to is the sum of what your employer contributed PLUS what you contributed by payroll deduction.
What the question is asking is "did you make any other contributions to your HSA other than what's listed on your W-2?"
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