If the LLC is a single-member LLC (i.e., you are the only member), then you would not issue a 1099-MISC as that would essentially be the same as issuing a 1099 to yourself.

Under no circumstances does the owner of a single member LLC or sole proprietorship issue themselves a tax reporting document of any type. Not ever. There are no exceptions. Your business is considered a disregarded entity by the IRS and all income/expenses are reported on SCH C as a physical part of your personal 1040 tax return. It does not matter if you are filing joint either.