You will just need to respond to them and let them know that the income reported on the K-1 was part of the other income you reported on Schedule C.
There should be a phone number on the letter you received that you can call to let them know that you did actually report all of the income, you just did not separate it out. If there is not a phone number on the letter, then you would just need to respond to them in writing letting them know that the income WAS included on your return. As long as you DID income the income on the Schedule C for MO, then you should not be subject to penalty.
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