Refund rejected, but I paid the $ due at the time when I submitted. Attempted to refile, but it is asking for the whole payment, even though partially paid. What to do?

[brianpswinney]

when attempting to refile, the amount that I already paid is not being deducted from what it is saying I already owe. I don't want to pay twice. What should I do?

[xmasbaby0]

How did you pay?   If you "paid" by entering banking information for a direct debit, the payment was not made from a rejected tax return.  When a tax return is rejected nothing at all is transmitted to the IRS.  Please explain what you did to pay your tax due.

[brianpswinney]

Thanks for the response. The amounts were taken from my bank account. I checked to see if they had been debited from the account back in April, and both the state and Federal were taken. I also checked to see if they were returned, and neither were returned. Thanks again for the response.