my account was charged to pay due taxes but it doesnt show up on my account

[DoninGA]

Your date of payment stays valid.  It may take the IRS up to 10 days to debit your account during this time of the tax season.

• Call IRS e-file Payment Services 24/7 at 888-353-4537 to inquire about or cancel your payment, but please wait 7 to 10 days after your return was accepted before calling.

[DawnC]

The only places you will see tax payments you made when filing are in your bank account and on your IRS Online Account page.    Your TurboTax return will always remain as you it was on the day you filed it, so no future payments will be applied.    

If you paid your tax bill and are waiting the payment to go through, don't fret >> The first page of your tax return PDF is the Filing instructions - that page will show the date, account and amount you have scheduled.   It normally takes the IRS a few days to take the  payment, but it is effective the date you scheduled it, and confirmed by your e-file acceptance receipt.  

See the IRS FAQ page