How did I go above the amount allowed for HSA contributions? I contributed less than 1K and I thought you were allowed to contribute 1.5K per year

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The limit is $3350 for single and $66--something for family. However, that limit is adjusted depending on how many months of the year you were eligible.

Also, turbotax treats the HSA contributions on your W-2 as taxable until you run the HSA interview on the Deductions and Credits page so that you can determine your eligibility based on the answers to those questions.