I have 2 states Michigan and Indiana. They are reciprocal states. I live in Michigan. In Turbo tax which State do I work on first or does it not matter?

[AnnetteB]

Typically if you are filing a resident return for one state and a non-resident return for another, you would work on the non-resident return first. 

Being reciprocal states though, you may not need to file both returns.  Usually the reciprocity agreement allows your non-resident employer to withhold your resident state taxes instead, so that both returns are not required.