The way that HSA contributions made through the employer work is that HSA contributions are deducted from Wages in boxes 1, 3, and 5 on your W-2. Since they are removed from all three boxes, you have no way of telling if the employer did this or not (unlike the contribution to a 401(k) plan which is removed only from box 1),
The only way you can determine if your employer removed the HSA contributions from Wages in boxes 1, 3, and 5 on your W-2 is to contact your payroll or HR department and ask them.
The same is true of your premiums for health coverage made through your employer.
If your employer confirms that these amounts were removed from Wages in boxes 1, 3, and 5 on your W-2, then you do not need to deduct them on your return, because they were already removed from income when your W-2 was printed.
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