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Question: Overpayment of CA LLC fee

Hello!

I have a question about California SMLLC elected to be taxed as S corp. I have a California SMLLC in 2024 and then submitted form 2553 and got approved to be taxed as S corp election in 2025 (effective 2025/1/1) . In early 2025, I paid CA 2025 Estimated LLC fee/LLC Tax and also paid 100-ES for S corp because at that time I did not receive IRS approval yet on LLC taxed as S corp for 2025. Later I received IRS approval that the business is elected to be taxed as S corp (effective from 2025/1/1). So right now, CA FTB have got both my payments for LLC and S corp. My questions are:

Should I contact CA FTB to update my 2025 estimated LLC fee payments category to the S corp account (still the same entity)? Should I call CA FTB to re-categorize the payment correctly? Or will CA FTB take care of it in tax return season?


Thanks very much!

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